Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC188H7C350 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 AC007663.1-201ENST00000438948 1240 ntBASIC18.51■□□□□ 0.55
CCDC188H7C350 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.51■□□□□ 0.55
CCDC188H7C350 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC188H7C350 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 AC113404.2-201ENST00000507884 177 ntBASIC18.51■□□□□ 0.55
CCDC188H7C350 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC188H7C350 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC188H7C350 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC188H7C350 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC188H7C350 MIR4651-201ENST00000582622 73 ntBASIC18.51■□□□□ 0.55
CCDC188H7C350 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CCDC188H7C350 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CCDC188H7C350 AC116562.4-202ENST00000641738 218 ntBASIC18.51■□□□□ 0.55
CCDC188H7C350 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC188H7C350 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC188H7C350 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC188H7C350 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC188H7C350 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC188H7C350 AGGF1P2-201ENST00000426656 2106 ntBASIC18.5■□□□□ 0.55
CCDC188H7C350 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC188H7C350 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC188H7C350 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC188H7C350 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC188H7C350 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC188H7C350 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC188H7C350 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC188H7C350 AC233702.5-201ENST00000584107 538 ntBASIC18.5■□□□□ 0.55
CCDC188H7C350 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC188H7C350 AC026471.5-201ENST00000615068 467 ntBASIC18.5■□□□□ 0.55
CCDC188H7C350 AC010653.2-201ENST00000623505 997 ntBASIC18.5■□□□□ 0.55
CCDC188H7C350 AL049637.2-201ENST00000641778 930 ntBASIC18.5■□□□□ 0.55
CCDC188H7C350 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC188H7C350 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC188H7C350 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC188H7C350 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC188H7C350 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC188H7C350 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC188H7C350 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC188H7C350 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CCDC188H7C350 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC188H7C350 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC188H7C350 CD99P1-205ENST00000527459 561 ntBASIC18.49■□□□□ 0.55
CCDC188H7C350 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC188H7C350 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC188H7C350 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC188H7C350 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC188H7C350 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC188H7C350 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC188H7C350 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC188H7C350 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC188H7C350 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC188H7C350 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.48■□□□□ 0.55
CCDC188H7C350 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms