Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NACAE9PAV3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NACAE9PAV3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 AC112907.2-201ENST00000448639 330 ntBASIC13.04□□□□□ -0.32
NACAE9PAV3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.04□□□□□ -0.32
NACAE9PAV3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.04□□□□□ -0.32
NACAE9PAV3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.04□□□□□ -0.32
NACAE9PAV3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.04□□□□□ -0.32
NACAE9PAV3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NACAE9PAV3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NACAE9PAV3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NACAE9PAV3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NACAE9PAV3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 AL163051.1-201ENST00000569214 1512 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.03□□□□□ -0.32
NACAE9PAV3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.03□□□□□ -0.32
NACAE9PAV3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 AC139887.4-201ENST00000607877 719 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 AC011558.1-201ENST00000623459 338 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.03□□□□□ -0.32
NACAE9PAV3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.03□□□□□ -0.32
NACAE9PAV3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NACAE9PAV3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
NACAE9PAV3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.03□□□□□ -0.32
NACAE9PAV3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.03□□□□□ -0.32
NACAE9PAV3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NACAE9PAV3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.03□□□□□ -0.32
NACAE9PAV3 LINC01126-201ENST00000623515 1646 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 MIR149-201ENST00000384879 89 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.03□□□□□ -0.32
NACAE9PAV3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.03□□□□□ -0.32
NACAE9PAV3 NEK4P2-201ENST00000580004 1012 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.03□□□□□ -0.32
NACAE9PAV3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.03□□□□□ -0.32
NACAE9PAV3 AP000550.4-202ENST00000639755 178 ntBASIC13.03□□□□□ -0.32
NACAE9PAV3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NACAE9PAV3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NACAE9PAV3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
NACAE9PAV3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NACAE9PAV3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.02□□□□□ -0.32
NACAE9PAV3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.02□□□□□ -0.32
NACAE9PAV3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NACAE9PAV3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.02□□□□□ -0.32
NACAE9PAV3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.02□□□□□ -0.32
NACAE9PAV3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NACAE9PAV3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
NACAE9PAV3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NACAE9PAV3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NACAE9PAV3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NACAE9PAV3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
NACAE9PAV3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms