Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC42SE2Q9NRR3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC42SE2Q9NRR3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC42SE2Q9NRR3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 AC021231.2-201ENST00000594613 730 ntBASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC42SE2Q9NRR3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 AC010501.1-201ENST00000606270 1962 ntBASIC16.82■□□□□ 0.28
CDC42SE2Q9NRR3 DUX4L29-201ENST00000425409 679 ntBASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDC42SE2Q9NRR3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC42SE2Q9NRR3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 ERN1-208ENST00000606895 2068 ntBASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC42SE2Q9NRR3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC42SE2Q9NRR3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42SE2Q9NRR3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.77■□□□□ 0.28
CDC42SE2Q9NRR3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42SE2Q9NRR3 AC093323.1-202ENST00000635031 2045 ntBASIC16.77■□□□□ 0.27
CDC42SE2Q9NRR3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CDC42SE2Q9NRR3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42SE2Q9NRR3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42SE2Q9NRR3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC42SE2Q9NRR3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDC42SE2Q9NRR3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC42SE2Q9NRR3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms