Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 DUX4L10-201ENST00000622460 1267 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L25-201ENST00000624915 1269 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.08■■□□□ 1.44
SCUBE1Q8IWY4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 AC092803.2-201ENST00000564287 1899 ntBASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SCUBE1Q8IWY4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SCUBE1Q8IWY4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SCUBE1Q8IWY4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCUBE1Q8IWY4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCUBE1Q8IWY4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCUBE1Q8IWY4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SCUBE1Q8IWY4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCUBE1Q8IWY4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.04■■□□□ 1.44
SCUBE1Q8IWY4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.04■■□□□ 1.44
SCUBE1Q8IWY4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
SCUBE1Q8IWY4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCUBE1Q8IWY4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.02■■□□□ 1.44
SCUBE1Q8IWY4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCUBE1Q8IWY4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCUBE1Q8IWY4 CR559946.2-201ENST00000623684 991 ntBASIC24.02■■□□□ 1.44
SCUBE1Q8IWY4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.43
SCUBE1Q8IWY4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 MIR3648-2-201ENST00000581792 180 ntBASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 MIR3648-1-201ENST00000615959 180 ntBASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
SCUBE1Q8IWY4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SCUBE1Q8IWY4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SCUBE1Q8IWY4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SCUBE1Q8IWY4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 AC018358.1-201ENST00000631079 1402 ntBASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.98■■□□□ 1.43
SCUBE1Q8IWY4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCUBE1Q8IWY4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SCUBE1Q8IWY4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.97■■□□□ 1.43
SCUBE1Q8IWY4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.96■■□□□ 1.43
SCUBE1Q8IWY4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SCUBE1Q8IWY4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
SCUBE1Q8IWY4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCUBE1Q8IWY4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.95■■□□□ 1.42
SCUBE1Q8IWY4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.95■■□□□ 1.42
SCUBE1Q8IWY4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SCUBE1Q8IWY4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 AC016575.1-201ENST00000607026 382 ntBASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 AC110285.7-201ENST00000624417 1536 ntBASIC23.94■■□□□ 1.42
SCUBE1Q8IWY4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCUBE1Q8IWY4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SCUBE1Q8IWY4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE1Q8IWY4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE1Q8IWY4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SCUBE1Q8IWY4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE1Q8IWY4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE1Q8IWY4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SCUBE1Q8IWY4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.91■■□□□ 1.42
SCUBE1Q8IWY4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SCUBE1Q8IWY4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SCUBE1Q8IWY4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms