Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZC3HC1Q86WB0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZC3HC1Q86WB0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZC3HC1Q86WB0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.43■■□□□ 1.5
ZC3HC1Q86WB0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ZC3HC1Q86WB0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 AC020928.2-201ENST00000588717 2197 ntBASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
ZC3HC1Q86WB0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 HLA-V-202ENST00000446817 847 ntBASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.41■■□□□ 1.5
ZC3HC1Q86WB0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.4■■□□□ 1.5
ZC3HC1Q86WB0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ZC3HC1Q86WB0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ZC3HC1Q86WB0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZC3HC1Q86WB0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
ZC3HC1Q86WB0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.39■■□□□ 1.49
ZC3HC1Q86WB0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ZC3HC1Q86WB0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
ZC3HC1Q86WB0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.37■■□□□ 1.49
ZC3HC1Q86WB0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.37■■□□□ 1.49
ZC3HC1Q86WB0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ZC3HC1Q86WB0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZC3HC1Q86WB0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZC3HC1Q86WB0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.36■■□□□ 1.49
ZC3HC1Q86WB0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZC3HC1Q86WB0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.35■■□□□ 1.49
ZC3HC1Q86WB0 CR559946.2-201ENST00000623684 991 ntBASIC24.35■■□□□ 1.49
ZC3HC1Q86WB0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
ZC3HC1Q86WB0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.35■■□□□ 1.49
ZC3HC1Q86WB0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 AC135731.1-201ENST00000569415 2548 ntBASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZC3HC1Q86WB0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3HC1Q86WB0 ERN1-208ENST00000606895 2068 ntBASIC24.33■■□□□ 1.49
ZC3HC1Q86WB0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3HC1Q86WB0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZC3HC1Q86WB0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ZC3HC1Q86WB0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 ABHD17AP4-201ENST00000411545 909 ntBASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 AL359258.2-201ENST00000564063 1566 ntBASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ZC3HC1Q86WB0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 AC010501.1-201ENST00000606270 1962 ntBASIC24.31■■□□□ 1.48
ZC3HC1Q86WB0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZC3HC1Q86WB0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZC3HC1Q86WB0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.3■■□□□ 1.48
ZC3HC1Q86WB0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZC3HC1Q86WB0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.28■■□□□ 1.48
ZC3HC1Q86WB0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.28■■□□□ 1.48
ZC3HC1Q86WB0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ZC3HC1Q86WB0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms