Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
SHC4Q6S5L8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.81■■■□□ 2.04
SHC4Q6S5L8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.81■■■□□ 2.04
SHC4Q6S5L8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.81■■■□□ 2.04
SHC4Q6S5L8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SHC4Q6S5L8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
SHC4Q6S5L8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
SHC4Q6S5L8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SHC4Q6S5L8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.8■■■□□ 2.04
SHC4Q6S5L8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SHC4Q6S5L8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
SHC4Q6S5L8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SHC4Q6S5L8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHC4Q6S5L8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SHC4Q6S5L8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.79■■■□□ 2.04
SHC4Q6S5L8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SHC4Q6S5L8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SHC4Q6S5L8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHC4Q6S5L8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
SHC4Q6S5L8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SHC4Q6S5L8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.76■■■□□ 2.03
SHC4Q6S5L8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.76■■■□□ 2.03
SHC4Q6S5L8 AC020928.2-201ENST00000588717 2197 ntBASIC27.75■■■□□ 2.03
SHC4Q6S5L8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SHC4Q6S5L8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.75■■■□□ 2.03
SHC4Q6S5L8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.75■■■□□ 2.03
SHC4Q6S5L8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
SHC4Q6S5L8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SHC4Q6S5L8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.74■■■□□ 2.03
SHC4Q6S5L8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SHC4Q6S5L8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SHC4Q6S5L8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SHC4Q6S5L8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
SHC4Q6S5L8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.72■■■□□ 2.03
SHC4Q6S5L8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.72■■■□□ 2.03
SHC4Q6S5L8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SHC4Q6S5L8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
SHC4Q6S5L8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SHC4Q6S5L8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SHC4Q6S5L8 ERN1-208ENST00000606895 2068 ntBASIC27.71■■■□□ 2.03
SHC4Q6S5L8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
SHC4Q6S5L8 MIR3648-2-201ENST00000581792 180 ntBASIC27.71■■■□□ 2.03
SHC4Q6S5L8 MIR3648-1-201ENST00000615959 180 ntBASIC27.71■■■□□ 2.03
SHC4Q6S5L8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
SHC4Q6S5L8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SHC4Q6S5L8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SHC4Q6S5L8 AL359258.2-201ENST00000564063 1566 ntBASIC27.7■■■□□ 2.03
SHC4Q6S5L8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SHC4Q6S5L8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.7■■■□□ 2.02
SHC4Q6S5L8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SHC4Q6S5L8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHC4Q6S5L8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHC4Q6S5L8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.69■■■□□ 2.02
SHC4Q6S5L8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SHC4Q6S5L8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SHC4Q6S5L8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 AC135731.1-201ENST00000569415 2548 ntBASIC27.67■■■□□ 2.02
SHC4Q6S5L8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.67■■■□□ 2.02
SHC4Q6S5L8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.66■■■□□ 2.02
SHC4Q6S5L8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SHC4Q6S5L8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SHC4Q6S5L8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SHC4Q6S5L8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.66■■■□□ 2.02
SHC4Q6S5L8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
SHC4Q6S5L8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.65■■■□□ 2.02
SHC4Q6S5L8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.65■■■□□ 2.02
SHC4Q6S5L8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SHC4Q6S5L8 AL359504.2-201ENST00000605506 1601 ntBASIC27.63■■■□□ 2.01
SHC4Q6S5L8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.63■■■□□ 2.01
SHC4Q6S5L8 AC016575.1-201ENST00000607026 382 ntBASIC27.63■■■□□ 2.01
SHC4Q6S5L8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SHC4Q6S5L8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SHC4Q6S5L8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.63■■■□□ 2.01
SHC4Q6S5L8 AC010501.1-201ENST00000606270 1962 ntBASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms