Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 AAD14YNL331C 1131 nt5.89□□□□□ -1.47
UFD1P53044 HTZ1YOL012C 405 nt5.89□□□□□ -1.47
UFD1P53044 YCL049CYCL049C 939 nt5.89□□□□□ -1.47
UFD1P53044 YNR005CYNR005C 405 nt5.88□□□□□ -1.47
UFD1P53044 RPL5YPL131W 894 nt5.88□□□□□ -1.47
UFD1P53044 MET8YBR213W 825 nt5.88□□□□□ -1.47
UFD1P53044 RGD2YFL047W 2145 nt5.87□□□□□ -1.47
UFD1P53044 GCN3YKR026C 918 nt5.87□□□□□ -1.47
UFD1P53044 SPG5YMR191W 1122 nt5.87□□□□□ -1.47
UFD1P53044 YBL070CYBL070C 321 nt5.87□□□□□ -1.47
UFD1P53044 APE4YHR113W 1473 nt5.87□□□□□ -1.47
UFD1P53044 VHT1YGR065C 1782 nt5.87□□□□□ -1.47
UFD1P53044 KNS1YLL019C 2214 nt5.87□□□□□ -1.47
UFD1P53044 YFL013W-AYFL013W-A 804 nt5.86□□□□□ -1.47
UFD1P53044 YJL144WYJL144W 315 nt5.86□□□□□ -1.47
UFD1P53044 REC107YJR021C 945 nt5.86□□□□□ -1.47
UFD1P53044 CUE4YML101C 354 nt5.86□□□□□ -1.47
UFD1P53044 PAB1YER165W 1734 nt5.85□□□□□ -1.47
UFD1P53044 PHO3YBR092C 1404 nt5.85□□□□□ -1.47
UFD1P53044 PEX31YGR004W 1389 nt5.85□□□□□ -1.47
UFD1P53044 HIS1YER055C 894 nt5.85□□□□□ -1.47
UFD1P53044 MGM101YJR144W 810 nt5.85□□□□□ -1.47
UFD1P53044 RAP1YNL216W 2484 nt5.85□□□□□ -1.47
UFD1P53044 NTE1YML059C 5040 nt5.85□□□□□ -1.47
UFD1P53044 MCP1YOR228C 909 nt5.84□□□□□ -1.47
UFD1P53044 HIS7YBR248C 1659 nt5.84□□□□□ -1.47
UFD1P53044 ATG22YCL038C 1587 nt5.84□□□□□ -1.48
UFD1P53044 MRPS28YDR337W 861 nt5.83□□□□□ -1.48
UFD1P53044 PTC7YHR076W 1032 nt5.83□□□□□ -1.48
UFD1P53044 YIL077CYIL077C 963 nt5.83□□□□□ -1.48
UFD1P53044 YLR162WYLR162W 357 nt5.83□□□□□ -1.48
UFD1P53044 RPL31BYLR406C 342 nt5.83□□□□□ -1.48
UFD1P53044 RIO1YOR119C 1455 nt5.83□□□□□ -1.48
UFD1P53044 YEL020CYEL020C 1683 nt5.82□□□□□ -1.48
UFD1P53044 URH1YDR400W 1023 nt5.82□□□□□ -1.48
UFD1P53044 DYS1YHR068W 1164 nt5.82□□□□□ -1.48
UFD1P53044 YKR032WYKR032W 315 nt5.82□□□□□ -1.48
UFD1P53044 LGE1YPL055C 999 nt5.82□□□□□ -1.48
UFD1P53044 MIP1YOR330C 3765 nt5.81□□□□□ -1.48
UFD1P53044 LDB19YOR322C 2457 nt5.81□□□□□ -1.48
UFD1P53044 YSC83YHR017W 1158 nt5.81□□□□□ -1.48
UFD1P53044 CBR1YIL043C 855 nt5.81□□□□□ -1.48
UFD1P53044 KTR5YNL029C 1569 nt5.8□□□□□ -1.48
UFD1P53044 YDL177CYDL177C 513 nt5.8□□□□□ -1.48
UFD1P53044 NAS6YGR232W 687 nt5.8□□□□□ -1.48
UFD1P53044 SML1YML058W 315 nt5.8□□□□□ -1.48
UFD1P53044 SPE3YPR069C 882 nt5.8□□□□□ -1.48
UFD1P53044 ADH5YBR145W 1056 nt5.8□□□□□ -1.48
UFD1P53044 ISC1YER019W 1434 nt5.8□□□□□ -1.48
UFD1P53044 YMR034CYMR034C 1305 nt5.79□□□□□ -1.48
UFD1P53044 PRI1YIR008C 1230 nt5.79□□□□□ -1.48
UFD1P53044 YJL163CYJL163C 1668 nt5.79□□□□□ -1.48
UFD1P53044 SUF5tG(CCC)O 72 nt5.78□□□□□ -1.48
UFD1P53044 YGL102CYGL102C 429 nt5.78□□□□□ -1.48
UFD1P53044 YJR107WYJR107W 987 nt5.78□□□□□ -1.48
UFD1P53044 FIT2YOR382W 462 nt5.78□□□□□ -1.48
UFD1P53044 SMX3YPR182W 261 nt5.78□□□□□ -1.48
UFD1P53044 SKI2YLR398C 3864 nt5.77□□□□□ -1.49
UFD1P53044 ZIM17YNL310C 525 nt5.77□□□□□ -1.49
UFD1P53044 YPR076WYPR076W 375 nt5.77□□□□□ -1.49
UFD1P53044 ICP55YER078C 1536 nt5.77□□□□□ -1.49
UFD1P53044 PLB3YOL011W 2061 nt5.76□□□□□ -1.49
UFD1P53044 YDR415CYDR415C 1125 nt5.76□□□□□ -1.49
UFD1P53044 AIM33YML087C 939 nt5.76□□□□□ -1.49
UFD1P53044 IRC11YOR013W 471 nt5.76□□□□□ -1.49
UFD1P53044 ERG10YPL028W 1197 nt5.76□□□□□ -1.49
UFD1P53044 YPR204WYPR204W 3099 nt5.76□□□□□ -1.49
UFD1P53044 COX15YER141W 1461 nt5.76□□□□□ -1.49
UFD1P53044 HXT17YNR072W 1695 nt5.75□□□□□ -1.49
UFD1P53044 RSA4YCR072C 1548 nt5.75□□□□□ -1.49
UFD1P53044 MPA43YNL249C 1629 nt5.75□□□□□ -1.49
UFD1P53044 MSC3YLR219W 2187 nt5.75□□□□□ -1.49
UFD1P53044 YUR1YJL139C 1287 nt5.75□□□□□ -1.49
UFD1P53044 YLL056CYLL056C 897 nt5.75□□□□□ -1.49
UFD1P53044 MRPL19YNL185C 477 nt5.75□□□□□ -1.49
UFD1P53044 TOS6YNL300W 309 nt5.75□□□□□ -1.49
UFD1P53044 SKN1YGR143W 2316 nt5.75□□□□□ -1.49
UFD1P53044 YHR020WYHR020W 2067 nt5.75□□□□□ -1.49
UFD1P53044 NUP49YGL172W 1419 nt5.74□□□□□ -1.49
UFD1P53044 SAC6YDR129C 1929 nt5.74□□□□□ -1.49
UFD1P53044 COX5AYNL052W 462 nt5.74□□□□□ -1.49
UFD1P53044 PUS4YNL292W 1212 nt5.74□□□□□ -1.49
UFD1P53044 TMA46YOR091W 1038 nt5.74□□□□□ -1.49
UFD1P53044 SEC62YPL094C 825 nt5.74□□□□□ -1.49
UFD1P53044 SES1YDR023W 1389 nt5.74□□□□□ -1.49
UFD1P53044 CSC1YLR241W 2349 nt5.74□□□□□ -1.49
UFD1P53044 CBK1YNL161W 2271 nt5.73□□□□□ -1.49
UFD1P53044 QNS1YHR074W 2145 nt5.73□□□□□ -1.49
UFD1P53044 YOL046CYOL046C 675 nt5.73□□□□□ -1.49
UFD1P53044 PPH21YDL134C 1110 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)BtG(GCC)B 71 nt5.72□□□□□ -1.49
UFD1P53044 SUF16tG(GCC)C 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)D1tG(GCC)D1 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)D2tG(GCC)D2 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)EtG(GCC)E 71 nt5.72□□□□□ -1.49
UFD1P53044 SUF20tG(GCC)F1 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)F2tG(GCC)F2 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)G1tG(GCC)G1 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)G2tG(GCC)G2 71 nt5.72□□□□□ -1.49
UFD1P53044 tG(GCC)J1tG(GCC)J1 71 nt5.72□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms