Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 CYB2YML054C 1776 nt5.24□□□□□ -1.57
VPS55P47111 ECM38YLR299W 1983 nt5.24□□□□□ -1.57
VPS55P47111 HXT2YMR011W 1626 nt5.23□□□□□ -1.57
VPS55P47111 URH1YDR400W 1023 nt5.23□□□□□ -1.57
VPS55P47111 CTF8YHR191C 402 nt5.23□□□□□ -1.57
VPS55P47111 CBR1YIL043C 855 nt5.23□□□□□ -1.57
VPS55P47111 OM45YIL136W 1182 nt5.23□□□□□ -1.57
VPS55P47111 YKL102CYKL102C 306 nt5.23□□□□□ -1.57
VPS55P47111 YKL153WYKL153W 510 nt5.23□□□□□ -1.57
VPS55P47111 SCS22YBL091C-A 528 nt5.23□□□□□ -1.57
VPS55P47111 YLL066CYLL066C 3618 nt5.23□□□□□ -1.57
VPS55P47111 BDF2YDL070W 1917 nt5.23□□□□□ -1.57
VPS55P47111 YHK8YHR048W 1545 nt5.23□□□□□ -1.57
VPS55P47111 YHR020WYHR020W 2067 nt5.22□□□□□ -1.57
VPS55P47111 YNL200CYNL200C 741 nt5.22□□□□□ -1.57
VPS55P47111 YPL136WYPL136W 369 nt5.22□□□□□ -1.57
VPS55P47111 ASN2YGR124W 1719 nt5.22□□□□□ -1.57
VPS55P47111 PPM2YOL141W 2088 nt5.22□□□□□ -1.57
VPS55P47111 GSH1YJL101C 2037 nt5.21□□□□□ -1.57
VPS55P47111 COX10YPL172C 1389 nt5.21□□□□□ -1.58
VPS55P47111 DOT1YDR440W 1749 nt5.21□□□□□ -1.58
VPS55P47111 PAB1YER165W 1734 nt5.21□□□□□ -1.58
VPS55P47111 RDN5-2RDN5-2 119 nt5.21□□□□□ -1.58
VPS55P47111 RDN5-3RDN5-3 119 nt5.21□□□□□ -1.58
VPS55P47111 RDN5-4RDN5-4 119 nt5.21□□□□□ -1.58
VPS55P47111 RDN5-5RDN5-5 119 nt5.21□□□□□ -1.58
VPS55P47111 YOS9YDR057W 1629 nt5.21□□□□□ -1.58
VPS55P47111 CYC8YBR112C 2901 nt5.21□□□□□ -1.58
VPS55P47111 COQ1YBR003W 1422 nt5.21□□□□□ -1.58
VPS55P47111 RBS1YDL189W 1374 nt5.2□□□□□ -1.58
VPS55P47111 ERG8YMR220W 1356 nt5.2□□□□□ -1.58
VPS55P47111 YRB2YIL063C 984 nt5.2□□□□□ -1.58
VPS55P47111 POR2YIL114C 846 nt5.2□□□□□ -1.58
VPS55P47111 ARC35YNR035C 1029 nt5.2□□□□□ -1.58
VPS55P47111 HBN1YCL026C-B 582 nt5.2□□□□□ -1.58
VPS55P47111 ARP3YJR065C 1350 nt5.19□□□□□ -1.58
VPS55P47111 ERS1YCR075C 783 nt5.19□□□□□ -1.58
VPS55P47111 YFL013W-AYFL013W-A 804 nt5.19□□□□□ -1.58
VPS55P47111 YHR213W-BYHR213W-B 300 nt5.19□□□□□ -1.58
VPS55P47111 ATG36YJL185C 882 nt5.19□□□□□ -1.58
VPS55P47111 YAR064WYAR064W 300 nt5.19□□□□□ -1.58
VPS55P47111 CUE4YML101C 354 nt5.19□□□□□ -1.58
VPS55P47111 YNL092WYNL092W 1203 nt5.19□□□□□ -1.58
VPS55P47111 MRPL23YOR150W 492 nt5.19□□□□□ -1.58
VPS55P47111 CEF1YMR213W 1773 nt5.19□□□□□ -1.58
VPS55P47111 TAH11YJR046W 1815 nt5.18□□□□□ -1.58
VPS55P47111 HIS1YER055C 894 nt5.18□□□□□ -1.58
VPS55P47111 MHT1YLL062C 975 nt5.17□□□□□ -1.58
VPS55P47111 YBR241CYBR241C 1467 nt5.17□□□□□ -1.58
VPS55P47111 GAL83YER027C 1254 nt5.16□□□□□ -1.58
VPS55P47111 QCR6YFR033C 444 nt5.16□□□□□ -1.58
VPS55P47111 YHR218W-AYHR218W-A 318 nt5.16□□□□□ -1.58
VPS55P47111 MDH1YKL085W 1005 nt5.16□□□□□ -1.58
VPS55P47111 TSR2YLR435W 618 nt5.16□□□□□ -1.58
VPS55P47111 RFC4YOL094C 972 nt5.16□□□□□ -1.58
VPS55P47111 YBL112CYBL112C 318 nt5.16□□□□□ -1.58
VPS55P47111 IRC11YOR013W 471 nt5.16□□□□□ -1.58
VPS55P47111 OPI11YPR044C 354 nt5.16□□□□□ -1.58
VPS55P47111 SKI2YLR398C 3864 nt5.16□□□□□ -1.58
VPS55P47111 YDR306CYDR306C 1437 nt5.15□□□□□ -1.58
VPS55P47111 PHO3YBR092C 1404 nt5.15□□□□□ -1.58
VPS55P47111 KNS1YLL019C 2214 nt5.15□□□□□ -1.58
VPS55P47111 HSP12YFL014W 330 nt5.15□□□□□ -1.59
VPS55P47111 TFG2YGR005C 1203 nt5.15□□□□□ -1.59
VPS55P47111 YLR361C-AYLR361C-A 297 nt5.15□□□□□ -1.59
VPS55P47111 SUR7YML052W 909 nt5.15□□□□□ -1.59
VPS55P47111 YMR252CYMR252C 405 nt5.15□□□□□ -1.59
VPS55P47111 RGD2YFL047W 2145 nt5.15□□□□□ -1.59
VPS55P47111 CCT3YJL014W 1605 nt5.15□□□□□ -1.59
VPS55P47111 EFT2YDR385W 2529 nt5.14□□□□□ -1.59
VPS55P47111 EFT1YOR133W 2529 nt5.14□□□□□ -1.59
VPS55P47111 YLR184WYLR184W 348 nt5.14□□□□□ -1.59
VPS55P47111 YBR027CYBR027C 333 nt5.14□□□□□ -1.59
VPS55P47111 RAP1YNL216W 2484 nt5.13□□□□□ -1.59
VPS55P47111 FRE5YOR384W 2085 nt5.13□□□□□ -1.59
VPS55P47111 FAL1YDR021W 1200 nt5.13□□□□□ -1.59
VPS55P47111 GCN3YKR026C 918 nt5.13□□□□□ -1.59
VPS55P47111 YKR045CYKR045C 552 nt5.13□□□□□ -1.59
VPS55P47111 DRE2YKR071C 1047 nt5.13□□□□□ -1.59
VPS55P47111 CTF19YPL018W 1110 nt5.13□□□□□ -1.59
VPS55P47111 STT3YGL022W 2157 nt5.13□□□□□ -1.59
VPS55P47111 ISC1YER019W 1434 nt5.13□□□□□ -1.59
VPS55P47111 CCT8YJL008C 1707 nt5.12□□□□□ -1.59
VPS55P47111 SLA2YNL243W 2907 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)BtG(GCC)B 71 nt5.12□□□□□ -1.59
VPS55P47111 SUF16tG(GCC)C 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)D1tG(GCC)D1 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)D2tG(GCC)D2 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)EtG(GCC)E 71 nt5.12□□□□□ -1.59
VPS55P47111 SUF20tG(GCC)F1 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)F2tG(GCC)F2 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)G1tG(GCC)G1 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)G2tG(GCC)G2 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)J1tG(GCC)J1 71 nt5.12□□□□□ -1.59
VPS55P47111 VMA3YEL027W 483 nt5.12□□□□□ -1.59
VPS55P47111 SUF23tG(GCC)J2 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)MtG(GCC)M 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)O1tG(GCC)O1 71 nt5.12□□□□□ -1.59
VPS55P47111 SUF17tG(GCC)O2 71 nt5.12□□□□□ -1.59
VPS55P47111 tG(GCC)P1tG(GCC)P1 71 nt5.12□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 57.9 ms