Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NKX2-1P43699 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.93■□□□□ 0.78
NKX2-1P43699 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-1P43699 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-1P43699 MIR762-201ENST00000390236 83 ntBASIC19.93■□□□□ 0.78
NKX2-1P43699 AC136428.2-201ENST00000563187 214 ntBASIC19.93■□□□□ 0.78
NKX2-1P43699 AC142381.3-201ENST00000568208 1670 ntBASIC19.93■□□□□ 0.78
NKX2-1P43699 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.93■□□□□ 0.78
NKX2-1P43699 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.93■□□□□ 0.78
NKX2-1P43699 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-1P43699 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-1P43699 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NKX2-1P43699 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-1P43699 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX2-1P43699 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-1P43699 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-1P43699 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NKX2-1P43699 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-1P43699 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-1P43699 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-1P43699 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-1P43699 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-1P43699 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
NKX2-1P43699 AC010501.1-201ENST00000606270 1962 ntBASIC19.9■□□□□ 0.78
NKX2-1P43699 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-1P43699 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-1P43699 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-1P43699 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-1P43699 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX2-1P43699 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NKX2-1P43699 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NKX2-1P43699 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX2-1P43699 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.88■□□□□ 0.77
NKX2-1P43699 AC108673.1-201ENST00000510422 1159 ntBASIC19.88■□□□□ 0.77
NKX2-1P43699 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.88■□□□□ 0.77
NKX2-1P43699 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-1P43699 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NKX2-1P43699 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX2-1P43699 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-1P43699 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-1P43699 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NKX2-1P43699 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX2-1P43699 WHAMMP3-201ENST00000611636 1609 ntBASIC19.87■□□□□ 0.77
NKX2-1P43699 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.87■□□□□ 0.77
NKX2-1P43699 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-1P43699 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-1P43699 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-1P43699 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.86■□□□□ 0.77
NKX2-1P43699 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NKX2-1P43699 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
NKX2-1P43699 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-1P43699 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NKX2-1P43699 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.85■□□□□ 0.77
NKX2-1P43699 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-1P43699 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-1P43699 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-1P43699 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-1P43699 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-1P43699 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NKX2-1P43699 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-1P43699 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.84■□□□□ 0.77
NKX2-1P43699 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-1P43699 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.84■□□□□ 0.77
NKX2-1P43699 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-1P43699 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NKX2-1P43699 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-1P43699 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-1P43699 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NKX2-1P43699 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.83■□□□□ 0.77
NKX2-1P43699 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.83■□□□□ 0.77
NKX2-1P43699 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NKX2-1P43699 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-1P43699 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-1P43699 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-1P43699 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NKX2-1P43699 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NKX2-1P43699 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-1P43699 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.82■□□□□ 0.76
NKX2-1P43699 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-1P43699 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-1P43699 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-1P43699 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-1P43699 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-1P43699 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-1P43699 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NKX2-1P43699 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-1P43699 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.8■□□□□ 0.76
NKX2-1P43699 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-1P43699 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-1P43699 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NKX2-1P43699 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-1P43699 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.8■□□□□ 0.76
NKX2-1P43699 AC022211.4-201ENST00000625094 2161 ntBASIC19.8■□□□□ 0.76
NKX2-1P43699 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms