Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 GDA1YEL042W 1557 nt7.21□□□□□ -1.25
MSH1P25846 NMA2YGR010W 1188 nt7.21□□□□□ -1.26
MSH1P25846 GCN3YKR026C 918 nt7.21□□□□□ -1.26
MSH1P25846 COX5AYNL052W 462 nt7.21□□□□□ -1.26
MSH1P25846 DPM1YPR183W 804 nt7.21□□□□□ -1.26
MSH1P25846 SGE1YPR198W 1632 nt7.2□□□□□ -1.26
MSH1P25846 LAT1YNL071W 1449 nt7.2□□□□□ -1.26
MSH1P25846 DOC1YGL240W 753 nt7.2□□□□□ -1.26
MSH1P25846 IMA5YJL216C 1746 nt7.2□□□□□ -1.26
MSH1P25846 YAL019W-AYAL019W-A 570 nt7.19□□□□□ -1.26
MSH1P25846 YJL213WYJL213W 996 nt7.19□□□□□ -1.26
MSH1P25846 KEL1YHR158C 3495 nt7.19□□□□□ -1.26
MSH1P25846 YDR415CYDR415C 1125 nt7.18□□□□□ -1.26
MSH1P25846 RRP46YGR095C 672 nt7.18□□□□□ -1.26
MSH1P25846 PTH2YBL057C 627 nt7.18□□□□□ -1.26
MSH1P25846 IRC11YOR013W 471 nt7.18□□□□□ -1.26
MSH1P25846 HEM1YDR232W 1647 nt7.18□□□□□ -1.26
MSH1P25846 GEF1YJR040W 2340 nt7.18□□□□□ -1.26
MSH1P25846 PIL1YGR086C 1020 nt7.17□□□□□ -1.26
MSH1P25846 HXT2YMR011W 1626 nt7.16□□□□□ -1.26
MSH1P25846 HIS1YER055C 894 nt7.16□□□□□ -1.26
MSH1P25846 COS10YNR075W 1125 nt7.16□□□□□ -1.26
MSH1P25846 VBA5YKR105C 1749 nt7.15□□□□□ -1.26
MSH1P25846 PRP2YNR011C 2631 nt7.15□□□□□ -1.26
MSH1P25846 YPT1YFL038C 621 nt7.15□□□□□ -1.26
MSH1P25846 RPL31BYLR406C 342 nt7.15□□□□□ -1.26
MSH1P25846 OST3YOR085W 1053 nt7.15□□□□□ -1.26
MSH1P25846 RIO1YOR119C 1455 nt7.15□□□□□ -1.27
MSH1P25846 YOS9YDR057W 1629 nt7.14□□□□□ -1.27
MSH1P25846 HEM2YGL040C 1029 nt7.14□□□□□ -1.27
MSH1P25846 ASN2YGR124W 1719 nt7.14□□□□□ -1.27
MSH1P25846 YHR145CYHR145C 357 nt7.14□□□□□ -1.27
MSH1P25846 TIF2YJL138C 1188 nt7.14□□□□□ -1.27
MSH1P25846 TIF1YKR059W 1188 nt7.14□□□□□ -1.27
MSH1P25846 PAM17YKR065C 594 nt7.14□□□□□ -1.27
MSH1P25846 YOX1YML027W 1158 nt7.14□□□□□ -1.27
MSH1P25846 ARA2YMR041C 1008 nt7.14□□□□□ -1.27
MSH1P25846 YBR284WYBR284W 2394 nt7.13□□□□□ -1.27
MSH1P25846 PMT3YOR321W 2262 nt7.13□□□□□ -1.27
MSH1P25846 POX1YGL205W 2247 nt7.13□□□□□ -1.27
MSH1P25846 TPO3YPR156C 1869 nt7.13□□□□□ -1.27
MSH1P25846 CIT2YCR005C 1383 nt7.13□□□□□ -1.27
MSH1P25846 YDL177CYDL177C 513 nt7.13□□□□□ -1.27
MSH1P25846 YKR032WYKR032W 315 nt7.13□□□□□ -1.27
MSH1P25846 UTR2YEL040W 1404 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)BtG(GCC)B 71 nt7.12□□□□□ -1.27
MSH1P25846 SUF16tG(GCC)C 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)D1tG(GCC)D1 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)D2tG(GCC)D2 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)EtG(GCC)E 71 nt7.12□□□□□ -1.27
MSH1P25846 SUF20tG(GCC)F1 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)F2tG(GCC)F2 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)G1tG(GCC)G1 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)G2tG(GCC)G2 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)J1tG(GCC)J1 71 nt7.12□□□□□ -1.27
MSH1P25846 SUF23tG(GCC)J2 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)MtG(GCC)M 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)O1tG(GCC)O1 71 nt7.12□□□□□ -1.27
MSH1P25846 SUF17tG(GCC)O2 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)P1tG(GCC)P1 71 nt7.12□□□□□ -1.27
MSH1P25846 tG(GCC)P2tG(GCC)P2 71 nt7.12□□□□□ -1.27
MSH1P25846 URA1YKL216W 945 nt7.12□□□□□ -1.27
MSH1P25846 CCC2YDR270W 3015 nt7.11□□□□□ -1.27
MSH1P25846 YDR401WYDR401W 564 nt7.11□□□□□ -1.27
MSH1P25846 SUF5tG(CCC)O 72 nt7.11□□□□□ -1.27
MSH1P25846 YML122CYML122C 381 nt7.11□□□□□ -1.27
MSH1P25846 GPI11YDR302W 660 nt7.1□□□□□ -1.27
MSH1P25846 TRR2YHR106W 1029 nt7.1□□□□□ -1.27
MSH1P25846 FBA1YKL060C 1080 nt7.1□□□□□ -1.27
MSH1P25846 PRS4YBL068W 981 nt7.1□□□□□ -1.27
MSH1P25846 YPL067CYPL067C 597 nt7.1□□□□□ -1.27
MSH1P25846 YPQ2YDR352W 954 nt7.09□□□□□ -1.27
MSH1P25846 PPM1YDR435C 987 nt7.09□□□□□ -1.27
MSH1P25846 REC107YJR021C 945 nt7.09□□□□□ -1.27
MSH1P25846 CRP1YHR146W 1398 nt7.08□□□□□ -1.28
MSH1P25846 LAG2YOL025W 1983 nt7.08□□□□□ -1.28
MSH1P25846 DUS4YLR405W 1104 nt7.08□□□□□ -1.28
MSH1P25846 YHM2YMR241W 945 nt7.08□□□□□ -1.28
MSH1P25846 NMD5YJR132W 3147 nt7.08□□□□□ -1.28
MSH1P25846 DML1YMR211W 1428 nt7.08□□□□□ -1.28
MSH1P25846 RGD1YBR260C 2001 nt7.08□□□□□ -1.28
MSH1P25846 ADE17YMR120C 1779 nt7.08□□□□□ -1.28
MSH1P25846 YIL055CYIL055C 1884 nt7.07□□□□□ -1.28
MSH1P25846 YPQ1YOL092W 927 nt7.07□□□□□ -1.28
MSH1P25846 CST26YBR042C 1194 nt7.07□□□□□ -1.28
MSH1P25846 ATP4YPL078C 735 nt7.07□□□□□ -1.28
MSH1P25846 TUB1YML085C 1344 nt7.06□□□□□ -1.28
MSH1P25846 RTC4YNL254C 1206 nt7.06□□□□□ -1.28
MSH1P25846 CSC1YLR241W 2349 nt7.05□□□□□ -1.28
MSH1P25846 STT3YGL022W 2157 nt7.05□□□□□ -1.28
MSH1P25846 YML6YML025C 861 nt7.05□□□□□ -1.28
MSH1P25846 RGT2YDL138W 2292 nt7.04□□□□□ -1.28
MSH1P25846 STB5YHR178W 2232 nt7.04□□□□□ -1.28
MSH1P25846 snR82snR82 268 nt7.04□□□□□ -1.28
MSH1P25846 AIM46YHR199C 933 nt7.04□□□□□ -1.28
MSH1P25846 EFT2YDR385W 2529 nt7.04□□□□□ -1.28
MSH1P25846 EFT1YOR133W 2529 nt7.04□□□□□ -1.28
MSH1P25846 ACS1YAL054C 2142 nt7.04□□□□□ -1.28
MSH1P25846 THI2YBR240C 1353 nt7.04□□□□□ -1.28
MSH1P25846 YSC83YHR017W 1158 nt7.03□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms