Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCL1P22362 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCL1P22362 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.2■□□□□ 0.98
CCL1P22362 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.2■□□□□ 0.98
CCL1P22362 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL1P22362 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL1P22362 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCL1P22362 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCL1P22362 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCL1P22362 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL1P22362 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCL1P22362 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.19■□□□□ 0.98
CCL1P22362 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCL1P22362 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCL1P22362 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL1P22362 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL1P22362 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CCL1P22362 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.18■□□□□ 0.98
CCL1P22362 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCL1P22362 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.18■□□□□ 0.98
CCL1P22362 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL1P22362 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCL1P22362 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCL1P22362 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.17■□□□□ 0.98
CCL1P22362 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.17■□□□□ 0.98
CCL1P22362 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL1P22362 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCL1P22362 AC010501.1-201ENST00000606270 1962 ntBASIC21.17■□□□□ 0.98
CCL1P22362 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCL1P22362 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCL1P22362 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCL1P22362 ZNRF2P2-203ENST00000454624 420 ntBASIC21.16■□□□□ 0.98
CCL1P22362 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCL1P22362 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCL1P22362 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCL1P22362 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL1P22362 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.14■□□□□ 0.97
CCL1P22362 HLA-V-202ENST00000446817 847 ntBASIC21.14■□□□□ 0.97
CCL1P22362 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.14■□□□□ 0.97
CCL1P22362 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL1P22362 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL1P22362 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.14■□□□□ 0.97
CCL1P22362 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCL1P22362 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCL1P22362 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCL1P22362 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.13■□□□□ 0.97
CCL1P22362 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL1P22362 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL1P22362 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCL1P22362 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCL1P22362 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL1P22362 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.11■□□□□ 0.97
CCL1P22362 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.11■□□□□ 0.97
CCL1P22362 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCL1P22362 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCL1P22362 ERN1-208ENST00000606895 2068 ntBASIC21.11■□□□□ 0.97
CCL1P22362 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.11■□□□□ 0.97
CCL1P22362 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.1■□□□□ 0.97
CCL1P22362 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CCL1P22362 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL1P22362 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCL1P22362 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.1■□□□□ 0.97
CCL1P22362 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.1■□□□□ 0.97
CCL1P22362 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.1■□□□□ 0.97
CCL1P22362 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.1■□□□□ 0.97
CCL1P22362 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCL1P22362 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.1■□□□□ 0.97
CCL1P22362 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CCL1P22362 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCL1P22362 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL1P22362 AL359258.2-201ENST00000564063 1566 ntBASIC21.09■□□□□ 0.97
CCL1P22362 AC135731.1-201ENST00000569415 2548 ntBASIC21.08■□□□□ 0.97
CCL1P22362 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.08■□□□□ 0.97
CCL1P22362 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL1P22362 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL1P22362 CR559946.2-201ENST00000623684 991 ntBASIC21.08■□□□□ 0.97
CCL1P22362 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.08■□□□□ 0.96
CCL1P22362 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCL1P22362 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL1P22362 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL1P22362 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCL1P22362 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms