Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDC42BPBQ9Y5S2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 LINC00982-205ENST00000420957 435 ntBASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 AC006116.8-202ENST00000587620 1550 ntBASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 AC025580.3-201ENST00000617932 1424 ntBASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 BCRP1-201ENST00000444246 691 ntBASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 ACTG1P14-201ENST00000446382 1122 ntBASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 AC099522.2-201ENST00000607001 744 ntBASIC26.68■■□□□ 1.86
CDC42BPBQ9Y5S2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDC42BPBQ9Y5S2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 CYP51A1P2-201ENST00000419457 1499 ntBASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 AC087163.2-201ENST00000457299 853 ntBASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 AC023141.13-201ENST00000604991 943 ntBASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDC42BPBQ9Y5S2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 AC007064.4-201ENST00000637740 555 ntBASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC26.65■■□□□ 1.86
CDC42BPBQ9Y5S2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC26.64■■□□□ 1.86
CDC42BPBQ9Y5S2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CDC42BPBQ9Y5S2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.64■■□□□ 1.86
CDC42BPBQ9Y5S2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CDC42BPBQ9Y5S2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CDC42BPBQ9Y5S2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 AC002558.1-201ENST00000488906 803 ntBASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC26.64■■□□□ 1.85
CDC42BPBQ9Y5S2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 HLA-J-203ENST00000494367 1087 ntBASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 CXCL1P1-201ENST00000502804 216 ntBASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDC42BPBQ9Y5S2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDC42BPBQ9Y5S2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms