Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 UNC93B7-201ENST00000509439 705 ntBASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.93■□□□□ 0.78
COL4A3BPQ9Y5P4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 TPM4P1-201ENST00000436100 807 ntBASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 MINOS1P3-201ENST00000457048 203 ntBASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 KRT18P31-201ENST00000506277 1292 ntBASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 AC091304.2-201ENST00000564639 760 ntBASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 IFNL4P1-201ENST00000607083 540 ntBASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 GNAS-203ENST00000306120 1878 ntBASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.92■□□□□ 0.78
COL4A3BPQ9Y5P4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 MTCL1P1-201ENST00000446207 792 ntBASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 AC090340.1-201ENST00000620778 4980 ntBASIC19.91■□□□□ 0.78
COL4A3BPQ9Y5P4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.9■□□□□ 0.78
COL4A3BPQ9Y5P4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms