Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 AC087499.1-201ENST00000418141 1075 ntBASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 HLA-F-220ENST00000434407 884 ntBASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 AC004263.2-201ENST00000617183 678 ntBASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA3Q9Y5H8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 AC084018.2-201ENST00000613093 2607 ntBASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 AC010203.1-204ENST00000548782 407 ntBASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 AL441883.1-201ENST00000566170 1045 ntBASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 AC124067.4-201ENST00000519691 2379 ntBASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHA3Q9Y5H8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 KRT18P48-201ENST00000434763 852 ntBASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 AC112698.1-201ENST00000510299 916 ntBASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA3Q9Y5H8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHA3Q9Y5H8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 COX11P1-201ENST00000489116 835 ntBASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA3Q9Y5H8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms