Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB3Q9Y5E6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 DRAXINP1-201ENST00000437611 948 ntBASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 GPR32P1-201ENST00000601788 811 ntBASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 AL121772.3-201ENST00000610840 674 ntBASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 AL163051.1-201ENST00000569214 1512 ntBASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB3Q9Y5E6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHB3Q9Y5E6 AC099398.1-201ENST00000567919 2776 ntBASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 IGHGP-201ENST00000390555 1178 ntBASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 AC090616.6-201ENST00000582640 721 ntBASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB3Q9Y5E6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHB3Q9Y5E6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms