Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
PCDHB9Q9Y5E1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 IL9RP2-201ENST00000423948 1312 ntBASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 MIR574-201ENST00000385209 96 ntBASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB9Q9Y5E1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB9Q9Y5E1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 NUS1P2-201ENST00000417358 873 ntBASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AC093909.1-201ENST00000504731 1122 ntBASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AL671883.3-201ENST00000603274 991 ntBASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 AL773604.1-201ENST00000617417 272 ntBASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB9Q9Y5E1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms