Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 PMS2P1-201ENST00000431037 1228 ntBASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 OR7E14P-202ENST00000530490 1290 ntBASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTDP1Q9Y5B0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 RPS2P1-201ENST00000434010 821 ntBASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 AL049840.3-201ENST00000602669 611 ntBASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 AC243591.1-201ENST00000452967 1364 ntBASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 RNF165-205ENST00000588679 2904 ntBASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTDP1Q9Y5B0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 HNRNPDP1-201ENST00000439535 754 ntBASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 MIR7706-201ENST00000613747 67 ntBASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTDP1Q9Y5B0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 HLA-J-201ENST00000462773 1622 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 AC096633.1-201ENST00000422446 749 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 RPL13AP23-201ENST00000480739 586 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 DUTP2-201ENST00000519164 463 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 SLC25A1P1-201ENST00000528351 927 ntBASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.53■□□□□ 0.88
CTDP1Q9Y5B0 NKAPP1-205ENST00000585790 367 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms