Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
UBQLN1Q9UMX0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 FAM197Y8-203ENST00000450145 560 ntBASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 SLC25A6P4-201ENST00000586535 553 ntBASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 AC064862.7-201ENST00000604520 867 ntBASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.07■□□□□ 0.64
UBQLN1Q9UMX0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 PMPCAP1-201ENST00000508114 1576 ntBASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
UBQLN1Q9UMX0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 MRPL3P1-201ENST00000400109 1033 ntBASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 KRT18P67-201ENST00000432816 1264 ntBASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 SIRPAP1-201ENST00000448467 1770 ntBASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBQLN1Q9UMX0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBQLN1Q9UMX0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms