Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCNIP1Q9NZI2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 LIN28AP1-201ENST00000429574 405 ntBASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 AC140113.3-201ENST00000605663 199 ntBASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KCNIP1Q9NZI2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AL157888.1-201ENST00000631930 593 ntBASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AC141257.4-201ENST00000634557 245 ntBASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AC136944.6-201ENST00000634818 245 ntBASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.98□□□□□ -0.01
KCNIP1Q9NZI2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KCNIP1Q9NZI2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms