Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 AL441883.1-201ENST00000566170 1045 ntBASIC16.62■□□□□ 0.25
RLIMQ9NVW2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.62■□□□□ 0.25
RLIMQ9NVW2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 LINC00167-201ENST00000530583 1419 ntBASIC16.62■□□□□ 0.25
RLIMQ9NVW2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RLIMQ9NVW2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC011676.5-201ENST00000624864 2660 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 RASA4DP-201ENST00000460726 1199 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 COX11P1-201ENST00000489116 835 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC034232.1-201ENST00000506026 1064 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 DUTP2-201ENST00000519164 463 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC005363.2-201ENST00000618631 242 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC079602.3-201ENST00000623931 403 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 AC097493.4-201ENST00000641197 219 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 NKILA-202ENST00000614771 2598 ntBASIC16.61■□□□□ 0.25
RLIMQ9NVW2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RLIMQ9NVW2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 TERF1P1-201ENST00000311003 1181 ntBASIC16.6■□□□□ 0.25
RLIMQ9NVW2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 AC113347.1-201ENST00000413321 391 ntBASIC16.6■□□□□ 0.25
RLIMQ9NVW2 AL137013.1-201ENST00000432946 1228 ntBASIC16.6■□□□□ 0.25
RLIMQ9NVW2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 AC139887.4-201ENST00000607877 719 ntBASIC16.6■□□□□ 0.25
RLIMQ9NVW2 AC011558.1-201ENST00000623459 338 ntBASIC16.6■□□□□ 0.25
RLIMQ9NVW2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.6■□□□□ 0.25
RLIMQ9NVW2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RLIMQ9NVW2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms