Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.76■□□□□ 0.43
TREX1Q9NSU2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.76■□□□□ 0.43
TREX1Q9NSU2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 AL121956.5-201ENST00000625261 221 ntBASIC17.75■□□□□ 0.43
TREX1Q9NSU2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 CROCCP2-202ENST00000412962 2773 ntBASIC17.75■□□□□ 0.43
TREX1Q9NSU2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 AL023806.1-201ENST00000603994 1649 ntBASIC17.75■□□□□ 0.43
TREX1Q9NSU2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TREX1Q9NSU2 AC010460.3-201ENST00000511359 1579 ntBASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 AL845331.1-201ENST00000424978 1190 ntBASIC17.74■□□□□ 0.43
TREX1Q9NSU2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 GUSBP12-201ENST00000513727 720 ntBASIC17.74■□□□□ 0.43
TREX1Q9NSU2 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 AL592071.1-201ENST00000611956 408 ntBASIC17.74■□□□□ 0.43
TREX1Q9NSU2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TREX1Q9NSU2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.73■□□□□ 0.43
TREX1Q9NSU2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREX1Q9NSU2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms