Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX2Q9NPC8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 AC097374.2-201ENST00000618617 1306 ntBASIC19.08■□□□□ 0.65
SIX2Q9NPC8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SIX2Q9NPC8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 LYSMD4-203ENST00000378904 2122 ntBASIC19.08■□□□□ 0.64
SIX2Q9NPC8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 LINC01238-205ENST00000567549 1107 ntBASIC19.08■□□□□ 0.64
SIX2Q9NPC8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX2Q9NPC8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AC011498.5-201ENST00000592027 486 ntBASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AC005336.2-201ENST00000593183 939 ntBASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AL592071.1-201ENST00000611956 408 ntBASIC19.07■□□□□ 0.64
SIX2Q9NPC8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX2Q9NPC8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX2Q9NPC8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms