Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1G1Q9HCP0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 SCARNA2-201ENST00000458748 420 ntBASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 AC109462.3-201ENST00000573934 613 ntBASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 AL139288.1-201ENST00000623748 933 ntBASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 AC073592.5-201ENST00000624854 528 ntBASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 AL356309.3-201ENST00000624132 1934 ntBASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CSNK1G1Q9HCP0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 SPDYE21P-201ENST00000413323 827 ntBASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 FAM197Y8-203ENST00000450145 560 ntBASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 SART3-203ENST00000546611 1184 ntBASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CSNK1G1Q9HCP0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 MRPL3P1-201ENST00000400109 1033 ntBASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 AC018712.1-201ENST00000455767 687 ntBASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 STK25P1-201ENST00000585406 838 ntBASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CSNK1G1Q9HCP0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1G1Q9HCP0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms