Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPF2Q9HAU5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPF2Q9HAU5 HLA-J-201ENST00000462773 1622 ntBASIC21.89■■□□□ 1.09
UPF2Q9HAU5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC21.89■■□□□ 1.09
UPF2Q9HAU5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
UPF2Q9HAU5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 AC116562.2-201ENST00000507042 360 ntBASIC21.88■■□□□ 1.09
UPF2Q9HAU5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 LINC00304-203ENST00000565008 1864 ntBASIC21.88■■□□□ 1.09
UPF2Q9HAU5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.88■■□□□ 1.09
UPF2Q9HAU5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 TNRC18P3-201ENST00000441896 2691 ntBASIC21.87■■□□□ 1.09
UPF2Q9HAU5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 CRYGFP-201ENST00000418459 633 ntBASIC21.87■■□□□ 1.09
UPF2Q9HAU5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 AC104390.1-201ENST00000555663 520 ntBASIC21.87■■□□□ 1.09
UPF2Q9HAU5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.87■■□□□ 1.09
UPF2Q9HAU5 FAM197Y4-202ENST00000622692 608 ntBASIC21.87■■□□□ 1.09
UPF2Q9HAU5 AC112497.1-201ENST00000624824 639 ntBASIC21.87■■□□□ 1.09
UPF2Q9HAU5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
UPF2Q9HAU5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 AC132938.6-201ENST00000623828 1655 ntBASIC21.86■■□□□ 1.09
UPF2Q9HAU5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF2Q9HAU5 NUDT16P1-203ENST00000513809 620 ntBASIC21.86■■□□□ 1.09
UPF2Q9HAU5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms