Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 AC034232.1-201ENST00000506026 1064 ntBASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 AC004263.2-201ENST00000617183 678 ntBASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TUBB1Q9H4B7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 AL441883.1-201ENST00000566170 1045 ntBASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 AL136038.4-201ENST00000603606 1261 ntBASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 AC145285.6-201ENST00000604632 637 ntBASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TUBB1Q9H4B7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 SPDYE15P-201ENST00000424157 909 ntBASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 AC010203.1-204ENST00000548782 407 ntBASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TUBB1Q9H4B7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.14■□□□□ 0.34
TUBB1Q9H4B7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TUBB1Q9H4B7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 AL121761.2-201ENST00000598007 1648 ntBASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 AC087499.1-201ENST00000418141 1075 ntBASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 HLA-F-220ENST00000434407 884 ntBASIC17.14■□□□□ 0.33
TUBB1Q9H4B7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms