Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 LINC00167-201ENST00000530583 1419 ntBASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
POLR2J3Q9H1A7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 ECEL1P3-201ENST00000427961 737 ntBASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 AC133963.1-201ENST00000504166 1679 ntBASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLR2J3Q9H1A7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 AL138688.1-201ENST00000624851 1594 ntBASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 AC034232.1-201ENST00000506026 1064 ntBASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLR2J3Q9H1A7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 CROCCP1-201ENST00000426910 5675 ntBASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 AP001094.4-201ENST00000579008 2176 ntBASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLR2J3Q9H1A7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms