Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 BX088651.1-201ENST00000540551 451 ntBASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AL023803.3-201ENST00000615559 522 ntBASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AL049637.2-201ENST00000641778 930 ntBASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COMMD4Q9H0A8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 AP001094.4-201ENST00000579008 2176 ntBASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 AC010240.3-201ENST00000607688 395 ntBASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 AC100803.2-201ENST00000562459 1963 ntBASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COMMD4Q9H0A8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 AC026471.5-201ENST00000615068 467 ntBASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.74■□□□□ 0.11
COMMD4Q9H0A8 AL121761.2-201ENST00000598007 1648 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms