Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 MIR574-201ENST00000385209 96 ntBASIC21.11■□□□□ 0.97
NBPF3Q9H094 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF3Q9H094 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.11■□□□□ 0.97
NBPF3Q9H094 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 AC097374.2-201ENST00000618617 1306 ntBASIC21.1■□□□□ 0.97
NBPF3Q9H094 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 SLC25A6P5-201ENST00000435663 894 ntBASIC21.1■□□□□ 0.97
NBPF3Q9H094 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 VENTXP7-201ENST00000475503 772 ntBASIC21.1■□□□□ 0.97
NBPF3Q9H094 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 AC138894.3-201ENST00000603787 634 ntBASIC21.1■□□□□ 0.97
NBPF3Q9H094 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF3Q9H094 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF3Q9H094 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 TP73-AS1-210ENST00000637775 1455 ntBASIC21.09■□□□□ 0.97
NBPF3Q9H094 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 RCN1P2-201ENST00000398357 915 ntBASIC21.09■□□□□ 0.97
NBPF3Q9H094 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 AC011467.2-201ENST00000598425 242 ntBASIC21.09■□□□□ 0.97
NBPF3Q9H094 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NBPF3Q9H094 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NBPF3Q9H094 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NBPF3Q9H094 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 MINOS1P3-201ENST00000457048 203 ntBASIC21.08■□□□□ 0.97
NBPF3Q9H094 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.08■□□□□ 0.97
NBPF3Q9H094 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.08■□□□□ 0.97
NBPF3Q9H094 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF3Q9H094 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF3Q9H094 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.08■□□□□ 0.96
NBPF3Q9H094 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.08■□□□□ 0.96
NBPF3Q9H094 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
NBPF3Q9H094 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NBPF3Q9H094 REXO1L11P-201ENST00000620964 1927 ntBASIC21.08■□□□□ 0.96
NBPF3Q9H094 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF3Q9H094 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.07■□□□□ 0.96
NBPF3Q9H094 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF3Q9H094 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.07■□□□□ 0.96
NBPF3Q9H094 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NBPF3Q9H094 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms