Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 AL671277.2-201ENST00000458060 996 ntBASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 FAM86EP-206ENST00000510506 987 ntBASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXP3Q9BZS1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXP3Q9BZS1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 AC132938.6-201ENST00000623828 1655 ntBASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 KRT18P56-201ENST00000507275 550 ntBASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 AC093458.2-201ENST00000623150 629 ntBASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 AL121956.5-201ENST00000625261 221 ntBASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 IER3-202ENST00000376377 1350 ntBASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXP3Q9BZS1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 HLA-J-201ENST00000462773 1622 ntBASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 LINC00304-203ENST00000565008 1864 ntBASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 AC009947.2-201ENST00000444014 672 ntBASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 KRT18P38-201ENST00000449496 1282 ntBASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 LINC01451-201ENST00000623792 534 ntBASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXP3Q9BZS1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms