Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.47■□□□□ 0.55
CDK5RAP1Q96SZ6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 AC079781.3-201ENST00000449110 356 ntBASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 AP002469.2-201ENST00000531724 424 ntBASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 MTDHP3-201ENST00000594186 672 ntBASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 AP001269.4-201ENST00000609611 512 ntBASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 KRT8P10-201ENST00000450021 1447 ntBASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDK5RAP1Q96SZ6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 AP000867.4-201ENST00000641616 219 ntBASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDK5RAP1Q96SZ6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 AC100803.2-201ENST00000562459 1963 ntBASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 AL139288.1-201ENST00000623748 933 ntBASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDK5RAP1Q96SZ6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms