Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC004706.3-202ENST00000621574 984 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 SERBP1P5-201ENST00000510079 1181 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 AL596325.1-201ENST00000563991 1082 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC116407.2-201ENST00000613639 860 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC009154.2-201ENST00000621177 724 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 FAM58DP-201ENST00000428076 619 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 IGHV3-65-201ENST00000523210 341 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 LINC02560-201ENST00000596379 459 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 AC004877.2-201ENST00000623941 599 ntBASIC15.06■□□□□ 0
CSMD1Q96PZ7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CSMD1Q96PZ7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CSMD1Q96PZ7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD1Q96PZ7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD1Q96PZ7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD1Q96PZ7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.05■□□□□ 0
CSMD1Q96PZ7 MRPS18AP1-201ENST00000414458 589 ntBASIC15.05■□□□□ 0
CSMD1Q96PZ7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.05■□□□□ 0
CSMD1Q96PZ7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.05■□□□□ 0
CSMD1Q96PZ7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSMD1Q96PZ7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.05■□□□□ 0
CSMD1Q96PZ7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD1Q96PZ7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.05■□□□□ 0
CSMD1Q96PZ7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD1Q96PZ7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 AC007613.1-201ENST00000572811 2597 ntBASIC15.05■□□□□ -0
CSMD1Q96PZ7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 RHOQP3-201ENST00000437982 621 ntBASIC15.05■□□□□ -0
CSMD1Q96PZ7 PRYP5-201ENST00000451909 266 ntBASIC15.05■□□□□ -0
CSMD1Q96PZ7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 MIR4751-201ENST00000578027 74 ntBASIC15.05■□□□□ -0
CSMD1Q96PZ7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 AL589182.2-201ENST00000619332 1049 ntBASIC15.05■□□□□ -0
CSMD1Q96PZ7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD1Q96PZ7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms