Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.09■□□□□ 0.97
NEK1Q96PY6 AC133963.1-201ENST00000504166 1679 ntBASIC21.09■□□□□ 0.97
NEK1Q96PY6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.08■□□□□ 0.97
NEK1Q96PY6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.08■□□□□ 0.97
NEK1Q96PY6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.08■□□□□ 0.97
NEK1Q96PY6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.08■□□□□ 0.97
NEK1Q96PY6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NEK1Q96PY6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
NEK1Q96PY6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.08■□□□□ 0.97
NEK1Q96PY6 AC090616.6-201ENST00000582640 721 ntBASIC21.08■□□□□ 0.97
NEK1Q96PY6 AC116407.4-201ENST00000623319 1061 ntBASIC21.08■□□□□ 0.97
NEK1Q96PY6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NEK1Q96PY6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NEK1Q96PY6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.96
NEK1Q96PY6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
NEK1Q96PY6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 PCED1CP-201ENST00000419887 785 ntBASIC21.07■□□□□ 0.96
NEK1Q96PY6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NEK1Q96PY6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 AL353801.3-201ENST00000609898 542 ntBASIC21.07■□□□□ 0.96
NEK1Q96PY6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NEK1Q96PY6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.07■□□□□ 0.96
NEK1Q96PY6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
NEK1Q96PY6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NEK1Q96PY6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 AC096633.1-201ENST00000422446 749 ntBASIC21.06■□□□□ 0.96
NEK1Q96PY6 AL845331.1-201ENST00000424978 1190 ntBASIC21.06■□□□□ 0.96
NEK1Q96PY6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NEK1Q96PY6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NEK1Q96PY6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 FZD10-202ENST00000539839 3282 ntBASIC21.05■□□□□ 0.96
NEK1Q96PY6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 BX276092.5-203ENST00000456199 560 ntBASIC21.05■□□□□ 0.96
NEK1Q96PY6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 AL121672.3-201ENST00000608644 468 ntBASIC21.05■□□□□ 0.96
NEK1Q96PY6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 LINC01451-201ENST00000623792 534 ntBASIC21.05■□□□□ 0.96
NEK1Q96PY6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NEK1Q96PY6 AC016734.2-201ENST00000624325 1377 ntBASIC21.05■□□□□ 0.96
NEK1Q96PY6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 PP12613-201ENST00000424958 2230 ntBASIC21.05■□□□□ 0.96
NEK1Q96PY6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NEK1Q96PY6 AC097374.2-201ENST00000618617 1306 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms