Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 AC079776.4-201ENST00000511039 504 ntBASIC13.86□□□□□ -0.19
DUX3Q96PT4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 AL591684.3-201ENST00000605187 298 ntBASIC13.86□□□□□ -0.19
DUX3Q96PT4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.86□□□□□ -0.19
DUX3Q96PT4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DUX3Q96PT4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DUX3Q96PT4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.85□□□□□ -0.19
DUX3Q96PT4 AC009154.2-201ENST00000621177 724 ntBASIC13.85□□□□□ -0.19
DUX3Q96PT4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
DUX3Q96PT4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DUX3Q96PT4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
DUX3Q96PT4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.84□□□□□ -0.19
DUX3Q96PT4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.84□□□□□ -0.19
DUX3Q96PT4 AC104581.1-202ENST00000635932 2618 ntBASIC13.84□□□□□ -0.19
DUX3Q96PT4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.84□□□□□ -0.19
DUX3Q96PT4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
DUX3Q96PT4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
DUX3Q96PT4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 RCN1P2-201ENST00000398357 915 ntBASIC13.84□□□□□ -0.19
DUX3Q96PT4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DUX3Q96PT4 FDX1P1-201ENST00000449115 551 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms