Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SNX27Q96L92 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 DDX43P3-201ENST00000441064 443 ntBASIC19.18■□□□□ 0.66
SNX27Q96L92 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.18■□□□□ 0.66
SNX27Q96L92 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.18■□□□□ 0.66
SNX27Q96L92 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.18■□□□□ 0.66
SNX27Q96L92 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SNX27Q96L92 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 AL354751.1-201ENST00000412768 1863 ntBASIC19.18■□□□□ 0.66
SNX27Q96L92 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SNX27Q96L92 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX27Q96L92 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX27Q96L92 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
SNX27Q96L92 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.17■□□□□ 0.66
SNX27Q96L92 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX27Q96L92 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 FAM197Y8-203ENST00000450145 560 ntBASIC19.17■□□□□ 0.66
SNX27Q96L92 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.17■□□□□ 0.66
SNX27Q96L92 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX27Q96L92 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.17■□□□□ 0.66
SNX27Q96L92 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.17■□□□□ 0.66
SNX27Q96L92 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SNX27Q96L92 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SNX27Q96L92 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX27Q96L92 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX27Q96L92 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.17■□□□□ 0.66
SNX27Q96L92 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SNX27Q96L92 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.17■□□□□ 0.66
SNX27Q96L92 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX27Q96L92 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.16■□□□□ 0.66
SNX27Q96L92 KRT18P67-201ENST00000432816 1264 ntBASIC19.16■□□□□ 0.66
SNX27Q96L92 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX27Q96L92 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX27Q96L92 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SNX27Q96L92 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.16■□□□□ 0.66
SNX27Q96L92 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SNX27Q96L92 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX27Q96L92 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SNX27Q96L92 AD001527.2-201ENST00000622994 785 ntBASIC19.16■□□□□ 0.66
SNX27Q96L92 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.16■□□□□ 0.66
SNX27Q96L92 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.16■□□□□ 0.66
SNX27Q96L92 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 AC135050.7-201ENST00000624508 2218 ntBASIC19.16■□□□□ 0.66
SNX27Q96L92 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SNX27Q96L92 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SNX27Q96L92 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNX27Q96L92 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX27Q96L92 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX27Q96L92 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX27Q96L92 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX27Q96L92 SART3-203ENST00000546611 1184 ntBASIC19.15■□□□□ 0.66
SNX27Q96L92 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.15■□□□□ 0.66
SNX27Q96L92 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms