Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PRYP5-201ENST00000451909 266 ntBASIC19.2■□□□□ 0.66
LRCH3Q96II8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 AC004706.3-202ENST00000621574 984 ntBASIC19.2■□□□□ 0.66
LRCH3Q96II8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRCH3Q96II8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRCH3Q96II8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 PMPCAP1-201ENST00000508114 1576 ntBASIC19.19■□□□□ 0.66
LRCH3Q96II8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 MIR943-201ENST00000401286 94 ntBASIC19.19■□□□□ 0.66
LRCH3Q96II8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.19■□□□□ 0.66
LRCH3Q96II8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 AL358472.5-202ENST00000641448 1267 ntBASIC19.19■□□□□ 0.66
LRCH3Q96II8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.19■□□□□ 0.66
LRCH3Q96II8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH3Q96II8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC099343.3-201ENST00000605834 2503 ntBASIC19.18■□□□□ 0.66
LRCH3Q96II8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC096734.2-201ENST00000562054 433 ntBASIC19.18■□□□□ 0.66
LRCH3Q96II8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC008667.4-201ENST00000607370 168 ntBASIC19.18■□□□□ 0.66
LRCH3Q96II8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 Z98044.1-201ENST00000632503 1764 ntBASIC19.18■□□□□ 0.66
LRCH3Q96II8 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.18■□□□□ 0.66
LRCH3Q96II8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH3Q96II8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH3Q96II8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.17■□□□□ 0.66
LRCH3Q96II8 RPS15P9-201ENST00000494093 319 ntBASIC19.17■□□□□ 0.66
LRCH3Q96II8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH3Q96II8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms