Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MIR1233-1-201ENST00000408722 82 ntBASIC17.82■□□□□ 0.44
SIPA1Q96FS4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 AC140113.2-201ENST00000604370 208 ntBASIC17.82■□□□□ 0.44
SIPA1Q96FS4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIPA1Q96FS4 AP002414.3-201ENST00000589352 1468 ntBASIC17.82■□□□□ 0.44
SIPA1Q96FS4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 COX5BP2-201ENST00000392354 334 ntBASIC17.81■□□□□ 0.44
SIPA1Q96FS4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 AL591424.1-201ENST00000442569 1213 ntBASIC17.81■□□□□ 0.44
SIPA1Q96FS4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIPA1Q96FS4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 UNC93B6-202ENST00000528242 690 ntBASIC17.8■□□□□ 0.44
SIPA1Q96FS4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AL356488.2-201ENST00000602755 427 ntBASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AC073592.4-201ENST00000623827 446 ntBASIC17.8■□□□□ 0.44
SIPA1Q96FS4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AC020763.4-201ENST00000623414 4170 ntBASIC17.8■□□□□ 0.44
SIPA1Q96FS4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIPA1Q96FS4 AC004817.3-201ENST00000602957 2129 ntBASIC17.8■□□□□ 0.44
SIPA1Q96FS4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIPA1Q96FS4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms