Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 AL121956.5-201ENST00000625261 221 ntBASIC18.16■□□□□ 0.5
RTP4Q96DX8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
RTP4Q96DX8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTP4Q96DX8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 FAM86EP-206ENST00000510506 987 ntBASIC18.15■□□□□ 0.5
RTP4Q96DX8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 AC005332.3-201ENST00000589904 676 ntBASIC18.15■□□□□ 0.5
RTP4Q96DX8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RTP4Q96DX8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTP4Q96DX8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTP4Q96DX8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.14■□□□□ 0.5
RTP4Q96DX8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTP4Q96DX8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTP4Q96DX8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.14■□□□□ 0.5
RTP4Q96DX8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 PCED1CP-201ENST00000419887 785 ntBASIC18.14■□□□□ 0.49
RTP4Q96DX8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 AL671277.2-201ENST00000458060 996 ntBASIC18.14■□□□□ 0.49
RTP4Q96DX8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTP4Q96DX8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.14■□□□□ 0.49
RTP4Q96DX8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTP4Q96DX8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTP4Q96DX8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 AC080080.1-201ENST00000625121 2420 ntBASIC18.13■□□□□ 0.49
RTP4Q96DX8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTP4Q96DX8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTP4Q96DX8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTP4Q96DX8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTP4Q96DX8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTP4Q96DX8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms