Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC58Q96CX6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC58Q96CX6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC58Q96CX6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC58Q96CX6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRC58Q96CX6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
LRRC58Q96CX6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LRRC58Q96CX6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LRRC58Q96CX6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.95■□□□□ 0.3
LRRC58Q96CX6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 AL355355.2-201ENST00000442321 338 ntBASIC16.95■□□□□ 0.3
LRRC58Q96CX6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 BX088651.1-201ENST00000540551 451 ntBASIC16.95■□□□□ 0.3
LRRC58Q96CX6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 ITM2C-210ENST00000620962 501 ntBASIC16.95■□□□□ 0.3
LRRC58Q96CX6 AC113410.3-201ENST00000623366 203 ntBASIC16.95■□□□□ 0.3
LRRC58Q96CX6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.95■□□□□ 0.3
LRRC58Q96CX6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC58Q96CX6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 KRT18P29-201ENST00000397031 1267 ntBASIC16.94■□□□□ 0.3
LRRC58Q96CX6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 CCR12P-201ENST00000446203 998 ntBASIC16.94■□□□□ 0.3
LRRC58Q96CX6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 AP001412.1-201ENST00000608405 714 ntBASIC16.94■□□□□ 0.3
LRRC58Q96CX6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC58Q96CX6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC58Q96CX6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms