Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.65■□□□□ 0.58
USP13Q92995 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.65■□□□□ 0.58
USP13Q92995 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.65■□□□□ 0.58
USP13Q92995 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.65■□□□□ 0.58
USP13Q92995 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.65■□□□□ 0.58
USP13Q92995 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.65■□□□□ 0.58
USP13Q92995 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.65■□□□□ 0.58
USP13Q92995 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.65■□□□□ 0.58
USP13Q92995 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 AC135050.7-201ENST00000624508 2218 ntBASIC18.65■□□□□ 0.58
USP13Q92995 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
USP13Q92995 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP13Q92995 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.65■□□□□ 0.58
USP13Q92995 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP13Q92995 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.65■□□□□ 0.58
USP13Q92995 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP13Q92995 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.64■□□□□ 0.58
USP13Q92995 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP13Q92995 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.64■□□□□ 0.57
USP13Q92995 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
USP13Q92995 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.64■□□□□ 0.57
USP13Q92995 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.64■□□□□ 0.57
USP13Q92995 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.64■□□□□ 0.57
USP13Q92995 AC018712.1-201ENST00000455767 687 ntBASIC18.64■□□□□ 0.57
USP13Q92995 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.64■□□□□ 0.57
USP13Q92995 RNPS1P1-201ENST00000507437 918 ntBASIC18.64■□□□□ 0.57
USP13Q92995 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.64■□□□□ 0.57
USP13Q92995 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.64■□□□□ 0.57
USP13Q92995 AL671883.3-201ENST00000603274 991 ntBASIC18.64■□□□□ 0.57
USP13Q92995 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.64■□□□□ 0.57
USP13Q92995 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.64■□□□□ 0.57
USP13Q92995 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.64■□□□□ 0.57
USP13Q92995 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 AC073592.3-201ENST00000625118 1834 ntBASIC18.64■□□□□ 0.57
USP13Q92995 IL9RP2-201ENST00000423948 1312 ntBASIC18.64■□□□□ 0.57
USP13Q92995 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.64■□□□□ 0.57
USP13Q92995 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
USP13Q92995 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP13Q92995 AC126763.1-201ENST00000552015 2118 ntBASIC18.64■□□□□ 0.57
USP13Q92995 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
USP13Q92995 WIZP1-201ENST00000531444 2299 ntBASIC18.63■□□□□ 0.57
USP13Q92995 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP13Q92995 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.63■□□□□ 0.57
USP13Q92995 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.63■□□□□ 0.57
USP13Q92995 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.63■□□□□ 0.57
USP13Q92995 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.63■□□□□ 0.57
USP13Q92995 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP13Q92995 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
USP13Q92995 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.63■□□□□ 0.57
USP13Q92995 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.63■□□□□ 0.57
USP13Q92995 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.63■□□□□ 0.57
USP13Q92995 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.63■□□□□ 0.57
USP13Q92995 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 AC132938.6-201ENST00000623828 1655 ntBASIC18.63■□□□□ 0.57
USP13Q92995 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP13Q92995 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
USP13Q92995 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 ESPNP-201ENST00000270691 2015 ntBASIC18.62■□□□□ 0.57
USP13Q92995 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.62■□□□□ 0.57
USP13Q92995 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP13Q92995 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
USP13Q92995 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.62■□□□□ 0.57
USP13Q92995 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.62■□□□□ 0.57
USP13Q92995 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms