Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AC064836.3-201ENST00000607928 673 ntBASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AC009113.1-201ENST00000570267 2443 ntBASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 AC125634.1-201ENST00000438758 1403 ntBASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
U2AF1L4Q8WU68 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
U2AF1L4Q8WU68 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 AL163051.1-201ENST00000569214 1512 ntBASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 LAGE3P1-201ENST00000425356 484 ntBASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 MIR4469-201ENST00000583919 79 ntBASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 AC008687.5-201ENST00000593746 558 ntBASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 AC068587.9-201ENST00000641814 219 ntBASIC20.33■□□□□ 0.85
U2AF1L4Q8WU68 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
U2AF1L4Q8WU68 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 MIR770-201ENST00000390219 98 ntBASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms