Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 AC128676.1-201ENST00000454392 318 ntBASIC17.34■□□□□ 0.37
HIPK4Q8NE63 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 KRT18P41-201ENST00000518924 1277 ntBASIC17.34■□□□□ 0.37
HIPK4Q8NE63 C1QBPP2-201ENST00000528754 825 ntBASIC17.34■□□□□ 0.37
HIPK4Q8NE63 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 AL109659.2-201ENST00000606809 1674 ntBASIC17.34■□□□□ 0.37
HIPK4Q8NE63 AC073195.1-201ENST00000607241 877 ntBASIC17.34■□□□□ 0.37
HIPK4Q8NE63 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HIPK4Q8NE63 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HIPK4Q8NE63 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 RARRES2P10-201ENST00000564312 460 ntBASIC17.33■□□□□ 0.36
HIPK4Q8NE63 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 AF186192.3-201ENST00000583427 947 ntBASIC17.33■□□□□ 0.36
HIPK4Q8NE63 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HIPK4Q8NE63 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 MIR6786-201ENST00000616843 113 ntBASIC17.32■□□□□ 0.36
HIPK4Q8NE63 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HIPK4Q8NE63 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms