Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AL671277.2-201ENST00000458060 996 ntBASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC005332.3-201ENST00000589904 676 ntBASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TTC9CQ8N5M4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 VENTXP5-201ENST00000523979 775 ntBASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 AC100803.2-201ENST00000562459 1963 ntBASIC14.11□□□□□ -0.15
TTC9CQ8N5M4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 AC083849.1-201ENST00000615227 514 ntBASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.1□□□□□ -0.15
TTC9CQ8N5M4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TTC9CQ8N5M4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms