Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AC019129.2-201ENST00000609837 1235 ntBASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AC008764.6-201ENST00000595909 2069 ntBASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARHGEF39Q8N4T4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 ABCD1P5-201ENST00000445663 754 ntBASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 FAAHP1-202ENST00000446499 1238 ntBASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 AL049757.1-201ENST00000616842 1596 ntBASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARHGEF39Q8N4T4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 AC079781.3-201ENST00000449110 356 ntBASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 BX276092.7-203ENST00000637198 1536 ntBASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 AP005117.1-201ENST00000584346 1413 ntBASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ARHGEF39Q8N4T4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 PMPCAP1-201ENST00000508114 1576 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AC004870.1-201ENST00000315132 882 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 RBM17P3-201ENST00000417687 1192 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AC005104.2-201ENST00000427818 678 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 TPM4P1-201ENST00000436100 807 ntBASIC16.77■□□□□ 0.28
ARHGEF39Q8N4T4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms