Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 MIR661-201ENST00000384842 89 ntBASIC24.5■■□□□ 1.51
XRN1Q8IZH2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 REXO1L3P-201ENST00000622202 1288 ntBASIC24.5■■□□□ 1.51
XRN1Q8IZH2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC24.5■■□□□ 1.51
XRN1Q8IZH2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 PMS2P4-201ENST00000412466 1052 ntBASIC24.49■■□□□ 1.51
XRN1Q8IZH2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 AC051619.7-201ENST00000568314 623 ntBASIC24.49■■□□□ 1.51
XRN1Q8IZH2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC24.49■■□□□ 1.51
XRN1Q8IZH2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 AC087163.2-201ENST00000457299 853 ntBASIC24.48■■□□□ 1.51
XRN1Q8IZH2 AC002558.1-201ENST00000488906 803 ntBASIC24.48■■□□□ 1.51
XRN1Q8IZH2 AC004449.1-201ENST00000564240 433 ntBASIC24.48■■□□□ 1.51
XRN1Q8IZH2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
XRN1Q8IZH2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC24.47■■□□□ 1.51
XRN1Q8IZH2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AC093214.1-201ENST00000511688 1107 ntBASIC24.47■■□□□ 1.51
XRN1Q8IZH2 AC112191.1-201ENST00000523689 701 ntBASIC24.47■■□□□ 1.51
XRN1Q8IZH2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
XRN1Q8IZH2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 AC067863.1-201ENST00000494933 530 ntBASIC24.46■■□□□ 1.51
XRN1Q8IZH2 AC087641.1-201ENST00000557561 1021 ntBASIC24.46■■□□□ 1.51
XRN1Q8IZH2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 MIR4745-201ENST00000577608 62 ntBASIC24.46■■□□□ 1.51
XRN1Q8IZH2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
XRN1Q8IZH2 AC073592.3-201ENST00000625118 1834 ntBASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms