Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 POM121L3P-201ENST00000419331 1163 ntBASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 KRT16P4-201ENST00000453883 522 ntBASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AC112698.1-201ENST00000510299 916 ntBASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 AL138781.2-201ENST00000617896 1843 ntBASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM48Q8IWZ4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AC093010.1-201ENST00000473625 1624 ntBASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AC132938.6-201ENST00000623828 1655 ntBASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM48Q8IWZ4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 AC022898.2-201ENST00000616822 1312 ntBASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 UNC93B7-201ENST00000509439 705 ntBASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM48Q8IWZ4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms