Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 ESPNP-201ENST00000270691 2015 ntBASIC22.21■■□□□ 1.15
COL23A1Q86Y22 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL23A1Q86Y22 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.2■■□□□ 1.15
COL23A1Q86Y22 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 TSPY16P-201ENST00000449843 468 ntBASIC22.2■■□□□ 1.14
COL23A1Q86Y22 GAPDHP21-201ENST00000450301 1010 ntBASIC22.2■■□□□ 1.14
COL23A1Q86Y22 TIMM8BP1-201ENST00000452384 211 ntBASIC22.2■■□□□ 1.14
COL23A1Q86Y22 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL23A1Q86Y22 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 TFAMP1-201ENST00000412727 736 ntBASIC22.19■■□□□ 1.14
COL23A1Q86Y22 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 DDX43P3-201ENST00000441064 443 ntBASIC22.19■■□□□ 1.14
COL23A1Q86Y22 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 AC051619.7-201ENST00000568314 623 ntBASIC22.19■■□□□ 1.14
COL23A1Q86Y22 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.19■■□□□ 1.14
COL23A1Q86Y22 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 AC018445.3-201ENST00000624177 1945 ntBASIC22.19■■□□□ 1.14
COL23A1Q86Y22 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
COL23A1Q86Y22 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 LINC00982-205ENST00000420957 435 ntBASIC22.18■■□□□ 1.14
COL23A1Q86Y22 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL23A1Q86Y22 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 BASP1P1-201ENST00000430708 665 ntBASIC22.17■■□□□ 1.14
COL23A1Q86Y22 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 AC109462.3-201ENST00000573934 613 ntBASIC22.17■■□□□ 1.14
COL23A1Q86Y22 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL23A1Q86Y22 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
COL23A1Q86Y22 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms