Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC25Q86WR0 AL138688.1-201ENST00000624851 1594 ntBASIC18.42■□□□□ 0.54
CCDC25Q86WR0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 AP003041.3-201ENST00000527151 707 ntBASIC18.42■□□□□ 0.54
CCDC25Q86WR0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC25Q86WR0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 AC132938.6-201ENST00000623828 1655 ntBASIC18.41■□□□□ 0.54
CCDC25Q86WR0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC25Q86WR0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 CD99P1-205ENST00000527459 561 ntBASIC18.4■□□□□ 0.54
CCDC25Q86WR0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.4■□□□□ 0.54
CCDC25Q86WR0 REXO1L10P-201ENST00000615707 1290 ntBASIC18.4■□□□□ 0.54
CCDC25Q86WR0 REXO1L12P-201ENST00000622156 912 ntBASIC18.4■□□□□ 0.54
CCDC25Q86WR0 AC112497.1-201ENST00000624824 639 ntBASIC18.4■□□□□ 0.54
CCDC25Q86WR0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC25Q86WR0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms