Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 AC139887.3-201ENST00000568585 713 ntBASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 AC011840.4-201ENST00000578471 627 ntBASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 AC008608.2-201ENST00000606089 416 ntBASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 AL691403.2-201ENST00000618460 490 ntBASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SH3RF1Q7Z6J0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 KRT18P55-202ENST00000578578 1546 ntBASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 AC132008.2-207ENST00000454517 770 ntBASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3RF1Q7Z6J0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 HNRNPDP1-201ENST00000439535 754 ntBASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3RF1Q7Z6J0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 AC132938.6-201ENST00000623828 1655 ntBASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3RF1Q7Z6J0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms