Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.9□□□□□ -0.02
CSMD2Q7Z408 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 CLDN5-201ENST00000403084 2357 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 HILS1-202ENST00000545329 423 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AC068137.2-201ENST00000605408 478 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ESPNP-201ENST00000270691 2015 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 GPS2P2-201ENST00000430745 888 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 COX5BP8-201ENST00000416911 349 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 CNN2P2-201ENST00000443536 909 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 CNN2P3-201ENST00000450201 906 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AL136317.3-201ENST00000618497 906 ntBASIC14.89□□□□□ -0.03
CSMD2Q7Z408 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CSMD2Q7Z408 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 AL033527.4-201ENST00000641026 673 ntBASIC14.88□□□□□ -0.03
CSMD2Q7Z408 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 U91328.1-201ENST00000437528 223 ntBASIC14.88□□□□□ -0.03
CSMD2Q7Z408 TIMM8BP1-201ENST00000452384 211 ntBASIC14.88□□□□□ -0.03
CSMD2Q7Z408 REXO1L3P-201ENST00000622202 1288 ntBASIC14.88□□□□□ -0.03
CSMD2Q7Z408 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 AC018445.3-201ENST00000624177 1945 ntBASIC14.88□□□□□ -0.03
CSMD2Q7Z408 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CSMD2Q7Z408 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 AC096633.1-201ENST00000422446 749 ntBASIC14.87□□□□□ -0.03
CSMD2Q7Z408 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.87□□□□□ -0.03
CSMD2Q7Z408 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSMD2Q7Z408 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms