Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.41■■□□□ 1.18
COPS6Q7L5N1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 AC116407.2-201ENST00000613639 860 ntBASIC22.41■■□□□ 1.18
COPS6Q7L5N1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COPS6Q7L5N1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AL020989.1-201ENST00000422979 469 ntBASIC22.4■■□□□ 1.18
COPS6Q7L5N1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AC109462.3-201ENST00000573934 613 ntBASIC22.4■■□□□ 1.18
COPS6Q7L5N1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AC006538.3-201ENST00000612495 578 ntBASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AC117500.6-201ENST00000624871 588 ntBASIC22.4■■□□□ 1.18
COPS6Q7L5N1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COPS6Q7L5N1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.39■■□□□ 1.18
COPS6Q7L5N1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COPS6Q7L5N1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COPS6Q7L5N1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COPS6Q7L5N1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.39■■□□□ 1.18
COPS6Q7L5N1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 KRT18P27-201ENST00000427733 1299 ntBASIC22.39■■□□□ 1.17
COPS6Q7L5N1 DDX43P3-201ENST00000441064 443 ntBASIC22.39■■□□□ 1.17
COPS6Q7L5N1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 UNC93B6-202ENST00000528242 690 ntBASIC22.39■■□□□ 1.17
COPS6Q7L5N1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 TERC-201ENST00000602385 541 ntBASIC22.39■■□□□ 1.17
COPS6Q7L5N1 Z83851.2-201ENST00000609564 659 ntBASIC22.39■■□□□ 1.17
COPS6Q7L5N1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.39■■□□□ 1.17
COPS6Q7L5N1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.39■■□□□ 1.17
COPS6Q7L5N1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 BX276092.7-203ENST00000637198 1536 ntBASIC22.38■■□□□ 1.17
COPS6Q7L5N1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 AC073621.1-201ENST00000392730 636 ntBASIC22.38■■□□□ 1.17
COPS6Q7L5N1 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.38■■□□□ 1.17
COPS6Q7L5N1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COPS6Q7L5N1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.37■■□□□ 1.17
COPS6Q7L5N1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COPS6Q7L5N1 PMS2P7-201ENST00000506558 1336 ntBASIC22.37■■□□□ 1.17
COPS6Q7L5N1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.37■■□□□ 1.17
COPS6Q7L5N1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COPS6Q7L5N1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms